J5_5UQ7_005

3D structure

PDB id

5UQ7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome complex with dnaX mRNA stemloop and E-site tRNA ('in' conformation)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CGAG*CGUAG*CGAG*CGCAAG*CAAAG

Length

24 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5UQ7|1|A|C|601
5UQ7|1|A|G|602
5UQ7|1|A|A|603
5UQ7|1|A|G|604
*
5UQ7|1|A|C|624
5UQ7|1|A|G|625
5UQ7|1|A|U|626
5UQ7|1|A|A|627
5UQ7|1|A|G|628
*
5UQ7|1|A|C|635
5UQ7|1|A|G|636
5UQ7|1|A|A|637
5UQ7|1|A|G|638
*
5UQ7|1|A|C|650
5UQ7|1|A|G|651
5UQ7|1|A|C|652|||A
5UQ7|1|A|A|652|||B
5UQ7|1|A|A|652|||C
5UQ7|1|A|G|652|||D
*
5UQ7|1|A|C|652|||W
5UQ7|1|A|A|653
5UQ7|1|A|A|654
5UQ7|1|A|A|655
5UQ7|1|A|G|656

Current chains

Chain A

23S rRNA

Nearby chains

Chain 8

50S ribosomal protein L35

Chain F

50S ribosomal protein L4

Chain P

50S ribosomal protein L15