J5_5V93_003
3D structure
- PDB id
- 5V93 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the 70S ribosome from Mycobacterium tuberculosis bound with Capreomycin
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4 Å
Loop
- Sequence
- CCG*CGUGCCU*AUGAG*CA*UG
- Length
- 19 nucleotides
- Bulged bases
- 5V93|1|A|U|664
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5V93|1|A|C|619
5V93|1|A|C|620
5V93|1|A|G|621
*
5V93|1|A|C|662
5V93|1|A|G|663
5V93|1|A|U|664
5V93|1|A|G|665
5V93|1|A|C|666
5V93|1|A|C|667
5V93|1|A|U|668
*
5V93|1|A|A|677
5V93|1|A|U|678
5V93|1|A|G|679
5V93|1|A|A|680
5V93|1|A|G|681
*
5V93|1|A|C|1392
5V93|1|A|A|1393
*
5V93|1|A|U|2255
5V93|1|A|G|2256
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 0
- 50S ribosomal protein L32
- Chain L
- 50S ribosomal protein L15
- Chain Q
- 50S ribosomal protein L20
- Chain R
- LSU ribosomal protein L21p
- Chain S
- 50S ribosomal protein L22
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