J5_5WE6_008

3D structure

PDB id

5WE6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome-EF-Tu H84A complex with GTP and cognate tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CAAG*CGGACGGG*CAC*GACU*AGGCAG

Length

25 nucleotides

Bulged bases

5WE6|1|a|A|60, 5WE6|1|a|A|109, 5WE6|1|a|C|352

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5WE6|1|a|C|58
5WE6|1|a|A|59
5WE6|1|a|A|60
5WE6|1|a|G|61
*
5WE6|1|a|C|106
5WE6|1|a|G|107
5WE6|1|a|G|108
5WE6|1|a|A|109
5WE6|1|a|C|110
5WE6|1|a|G|111
5WE6|1|a|G|112
5WE6|1|a|G|113
*
5WE6|1|a|C|314
5WE6|1|a|A|315
5WE6|1|a|C|316
*
5WE6|1|a|G|337
5WE6|1|a|A|338
5WE6|1|a|C|339
5WE6|1|a|U|340
*
5WE6|1|a|A|349
5WE6|1|a|G|350
5WE6|1|a|G|351
5WE6|1|a|C|352
5WE6|1|a|A|353
5WE6|1|a|G|354

Current chains

Chain a

16S rRNA

Nearby chains

Chain K

50S ribosomal protein L14

Chain P

50S ribosomal protein L19

Chain p

30S ribosomal protein S16

Chain t

30S ribosomal protein S20

Chain z

Elongation factor Tu 2