J5_5WF0_010
3D structure
- PDB id
- 5WF0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C2)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- CAAG*CGGACGGG*CAC*GACUCC*GGAGGCAG
- Length
- 29 nucleotides
- Bulged bases
- 5WF0|1|a|A|60, 5WF0|1|a|A|109, 5WF0|1|a|C|341, 5WF0|1|a|C|352
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5WF0|1|a|C|58
5WF0|1|a|A|59
5WF0|1|a|A|60
5WF0|1|a|G|61
*
5WF0|1|a|C|106
5WF0|1|a|G|107
5WF0|1|a|G|108
5WF0|1|a|A|109
5WF0|1|a|C|110
5WF0|1|a|G|111
5WF0|1|a|G|112
5WF0|1|a|G|113
*
5WF0|1|a|C|314
5WF0|1|a|A|315
5WF0|1|a|C|316
*
5WF0|1|a|G|337
5WF0|1|a|A|338
5WF0|1|a|C|339
5WF0|1|a|U|340
5WF0|1|a|C|341
5WF0|1|a|C|342
*
5WF0|1|a|G|347
5WF0|1|a|G|348
5WF0|1|a|A|349
5WF0|1|a|G|350
5WF0|1|a|G|351
5WF0|1|a|C|352
5WF0|1|a|A|353
5WF0|1|a|G|354
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain K
- 50S ribosomal protein L14
- Chain P
- 50S ribosomal protein L19
- Chain p
- 30S ribosomal protein S16
- Chain t
- 30S ribosomal protein S20
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