J5_5WFS_007

3D structure

PDB id

5WFS (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C4)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CUGG*CGUG*CUUUC*GAAGC*GCAAG

Length

23 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5WFS|1|a|C|36
5WFS|1|a|U|37
5WFS|1|a|G|38
5WFS|1|a|G|39
*
5WFS|1|a|C|403
5WFS|1|a|G|404
5WFS|1|a|U|405
5WFS|1|a|G|406
*
5WFS|1|a|C|436
5WFS|1|a|U|437
5WFS|1|a|U|438
5WFS|1|a|U|439
5WFS|1|a|C|440
*
5WFS|1|a|G|497
5WFS|1|a|A|498
5WFS|1|a|A|499
5WFS|1|a|G|500
5WFS|1|a|C|501
*
5WFS|1|a|G|544
5WFS|1|a|C|545
5WFS|1|a|A|546
5WFS|1|a|A|547
5WFS|1|a|G|548

Current chains

Chain a

16S rRNA

Nearby chains

Chain d

30S ribosomal protein S4

Chain l

30S ribosomal protein S12

Chain z

Elongation factor Tu 2