J5_5WIS_014

3D structure

PDB id

5WIS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with methymycin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.7 Å

Loop

Sequence

CGAG*CGUAG*CGAG*CGCAAGC*GCAAAG

Length

26 nucleotides

Bulged bases

5WIS|1|2A|A|652|||B

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5WIS|1|2A|C|601
5WIS|1|2A|G|602
5WIS|1|2A|A|603
5WIS|1|2A|G|604
*
5WIS|1|2A|C|624
5WIS|1|2A|G|625
5WIS|1|2A|U|626
5WIS|1|2A|A|627
5WIS|1|2A|G|628
*
5WIS|1|2A|C|635
5WIS|1|2A|G|636
5WIS|1|2A|A|637
5WIS|1|2A|G|638
*
5WIS|1|2A|C|650
5WIS|1|2A|G|651
5WIS|1|2A|C|652
5WIS|1|2A|A|652|||A
5WIS|1|2A|A|652|||B
5WIS|1|2A|G|652|||C
5WIS|1|2A|C|652|||D
*
5WIS|1|2A|G|652|||U
5WIS|1|2A|C|652|||V
5WIS|1|2A|A|653
5WIS|1|2A|A|654
5WIS|1|2A|A|655
5WIS|1|2A|G|656

Current chains

Chain 2A

23S ribosomal RNA

Nearby chains

Chain 28

50S ribosomal protein L35

Chain 2F

50S ribosomal protein L4

Chain 2P

50S ribosomal protein L15