J5_5ZEB_005

3D structure

PDB id

5ZEB (explore in PDB, NAKB, or RNA 3D Hub)

Description

M. Smegmatis P/P state 70S ribosome structure

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CGAG*CGCAG*CGAG*CGUAUC*GUGUAG

Length

25 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5ZEB|1|A|C|694
5ZEB|1|A|G|695
5ZEB|1|A|A|696
5ZEB|1|A|G|697
*
5ZEB|1|A|C|718
5ZEB|1|A|G|719
5ZEB|1|A|C|720
5ZEB|1|A|A|721
5ZEB|1|A|G|722
*
5ZEB|1|A|C|729
5ZEB|1|A|G|730
5ZEB|1|A|A|731
5ZEB|1|A|G|732
*
5ZEB|1|A|C|744
5ZEB|1|A|G|745
5ZEB|1|A|U|746
5ZEB|1|A|A|747
5ZEB|1|A|U|748
5ZEB|1|A|C|749
*
5ZEB|1|A|G|766
5ZEB|1|A|U|767
5ZEB|1|A|G|768
5ZEB|1|A|U|769
5ZEB|1|A|A|770
5ZEB|1|A|G|771

Current chains

Chain A

23S rRNA

Nearby chains

Chain 6

50S ribosomal protein L35

Chain E

50S ribosomal protein L4

Chain M

50S ribosomal protein L15