J5_5ZEP_005

3D structure

PDB id

5ZEP (explore in PDB, NAKB, or RNA 3D Hub)

Description

M. smegmatis hibernating state 70S ribosome structure

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CGAG*CGCAG*CGAG*CGUAUC*GUGUAG

Length

25 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5ZEP|1|A|C|694
5ZEP|1|A|G|695
5ZEP|1|A|A|696
5ZEP|1|A|G|697
*
5ZEP|1|A|C|718
5ZEP|1|A|G|719
5ZEP|1|A|C|720
5ZEP|1|A|A|721
5ZEP|1|A|G|722
*
5ZEP|1|A|C|729
5ZEP|1|A|G|730
5ZEP|1|A|A|731
5ZEP|1|A|G|732
*
5ZEP|1|A|C|744
5ZEP|1|A|G|745
5ZEP|1|A|U|746
5ZEP|1|A|A|747
5ZEP|1|A|U|748
5ZEP|1|A|C|749
*
5ZEP|1|A|G|766
5ZEP|1|A|U|767
5ZEP|1|A|G|768
5ZEP|1|A|U|769
5ZEP|1|A|A|770
5ZEP|1|A|G|771

Current chains

Chain A

23S rRNA

Nearby chains

Chain 3

50S ribosomal protein L35

Chain E

50S ribosomal protein L4

Chain M

50S ribosomal protein L15