J5_5ZET_005

3D structure

PDB id

5ZET (explore in PDB, NAKB, or RNA 3D Hub)

Description

M. smegmatis P/P state 50S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CGAG*CGCAG*CGAG*CGUAUC*GUGUAG

Length

25 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5ZET|1|A|C|694
5ZET|1|A|G|695
5ZET|1|A|A|696
5ZET|1|A|G|697
*
5ZET|1|A|C|718
5ZET|1|A|G|719
5ZET|1|A|C|720
5ZET|1|A|A|721
5ZET|1|A|G|722
*
5ZET|1|A|C|729
5ZET|1|A|G|730
5ZET|1|A|A|731
5ZET|1|A|G|732
*
5ZET|1|A|C|744
5ZET|1|A|G|745
5ZET|1|A|U|746
5ZET|1|A|A|747
5ZET|1|A|U|748
5ZET|1|A|C|749
*
5ZET|1|A|G|766
5ZET|1|A|U|767
5ZET|1|A|G|768
5ZET|1|A|U|769
5ZET|1|A|A|770
5ZET|1|A|G|771

Current chains

Chain A

23S rRNA

Nearby chains

Chain 6

50S ribosomal protein L35

Chain E

50S ribosomal protein L4

Chain M

50S ribosomal protein L15