J5_6BOK_015
3D structure
- PDB id
- 6BOK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli release factor 1 (containing deletion 302-304) bound to the 70S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.55 Å
Loop
- Sequence
- AAAAGACC*GGAUAACA*UCG(2MA)UGUC*GGUUCAG*CGGUCU
- Length
- 37 nucleotides
- Bulged bases
- 6BOK|1|EB|A|2062, 6BOK|1|EB|A|2448, 6BOK|1|EB|U|2449, 6BOK|1|EB|U|2506, 6BOK|1|EB|U|2609
- QA status
- Modified nucleotides: 2MA
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6BOK|1|EB|A|2057
6BOK|1|EB|A|2058
6BOK|1|EB|A|2059
6BOK|1|EB|A|2060
6BOK|1|EB|G|2061
6BOK|1|EB|A|2062
6BOK|1|EB|C|2063
6BOK|1|EB|C|2064
*
6BOK|1|EB|G|2446
6BOK|1|EB|G|2447
6BOK|1|EB|A|2448
6BOK|1|EB|U|2449
6BOK|1|EB|A|2450
6BOK|1|EB|A|2451
6BOK|1|EB|C|2452
6BOK|1|EB|A|2453
*
6BOK|1|EB|U|2500
6BOK|1|EB|C|2501
6BOK|1|EB|G|2502
6BOK|1|EB|2MA|2503
6BOK|1|EB|U|2504
6BOK|1|EB|G|2505
6BOK|1|EB|U|2506
6BOK|1|EB|C|2507
*
6BOK|1|EB|G|2582
6BOK|1|EB|G|2583
6BOK|1|EB|U|2584
6BOK|1|EB|U|2585
6BOK|1|EB|C|2586
6BOK|1|EB|A|2587
6BOK|1|EB|G|2588
*
6BOK|1|EB|C|2606
6BOK|1|EB|G|2607
6BOK|1|EB|G|2608
6BOK|1|EB|U|2609
6BOK|1|EB|C|2610
6BOK|1|EB|U|2611
Current chains
- Chain EB
- 23S ribosomal RNA
Nearby chains
- Chain AC
- 50S ribosomal protein L27
- Chain FC
- 50S ribosomal protein L32
- Chain HB
- 50S ribosomal protein L2
- Chain HD
- Peptide chain release factor 1
- Chain IB
- 50S ribosomal protein L3
- Chain JB
- 50S ribosomal protein L4
- Chain LC
- Small subunit ribosomal RNA fragment; SSU rRNA fragment
- Chain PB
- 50S ribosomal protein L15
- Chain QB
- 50S ribosomal protein L16
- Chain WB
- 50S ribosomal protein L22
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