3D structure

PDB id
6BZ6 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Thermus thermophilus 70S complex containing 16S G347U ram mutation and empty A site
Experimental method
X-RAY DIFFRACTION
Resolution
3.18 Å

Loop

Sequence
CGAG*CGUAG*CGAG*CGCAAG*CAAAG
Length
24 nucleotides
Bulged bases
6BZ6|1|YA|A|654
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6BZ6|1|YA|C|601
6BZ6|1|YA|G|602
6BZ6|1|YA|A|603
6BZ6|1|YA|G|604
*
6BZ6|1|YA|C|624
6BZ6|1|YA|G|625
6BZ6|1|YA|U|626
6BZ6|1|YA|A|627
6BZ6|1|YA|G|628
*
6BZ6|1|YA|C|635
6BZ6|1|YA|G|636
6BZ6|1|YA|A|637
6BZ6|1|YA|G|638
*
6BZ6|1|YA|C|650
6BZ6|1|YA|G|651
6BZ6|1|YA|C|652
6BZ6|1|YA|A|653
6BZ6|1|YA|A|654
6BZ6|1|YA|G|654|||A
*
6BZ6|1|YA|C|654|||T
6BZ6|1|YA|A|654|||U
6BZ6|1|YA|A|654|||V
6BZ6|1|YA|A|655
6BZ6|1|YA|G|656

Current chains

Chain YA
23S rRNA

Nearby chains

Chain Y8
50S ribosomal protein L35
Chain YF
50S ribosomal protein L4
Chain YP
50S ribosomal protein L15

Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.4532 s