J5_6CAE_014

3D structure

PDB id

6CAE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with NOSO-95179 antibiotic and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.6 Å

Loop

Sequence

CGAG*CGUAG*CGAG*CGCAAG*CAAAG

Length

24 nucleotides

Bulged bases

6CAE|1|2A|A|652|||B

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6CAE|1|2A|C|601
6CAE|1|2A|G|602
6CAE|1|2A|A|603
6CAE|1|2A|G|604
*
6CAE|1|2A|C|624
6CAE|1|2A|G|625
6CAE|1|2A|U|626
6CAE|1|2A|A|627
6CAE|1|2A|G|628
*
6CAE|1|2A|C|635
6CAE|1|2A|G|636
6CAE|1|2A|A|637
6CAE|1|2A|G|638
*
6CAE|1|2A|C|650
6CAE|1|2A|G|651
6CAE|1|2A|C|652
6CAE|1|2A|A|652|||A
6CAE|1|2A|A|652|||B
6CAE|1|2A|G|652|||C
*
6CAE|1|2A|C|652|||V
6CAE|1|2A|A|653
6CAE|1|2A|A|654
6CAE|1|2A|A|655
6CAE|1|2A|G|656

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains

Chain 28

50S ribosomal protein L35

Chain 2F

50S ribosomal protein L4

Chain 2P

50S ribosomal protein L15