Loop J5_6ENJ

3D structure

PDB id: 6ENJ (explore in PDB, NAKB, or RNA 3D Hub)
Description: Polyproline-stalled ribosome in the presence of A+P site tRNA and elongation-factor P (EF-P)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.7 Å

Loop

Sequence: CUGG*CGUGUAUGAAGAAG*UGUAAAGUACUUUCAGCG*CGCAGAAGAAGC*GCAAG
Length: 53 nucleotides
Bulged bases: 6ENJ|1|a|A|412
QA status: Valid loop

Sequence variability

R3DSVS

Structural variability across Equivalence Class

R3DMCS EC

Structural variability across Rfam

R3DMCS Rfam

Detailed Annotation: No text annotation
Broad Annotation: No text annotation
Motif group: Not in a motif group
Basepair signature: Not available
Number of instances in this motif group: 0

Unit IDs

6ENJ|1|a|C|36
6ENJ|1|a|U|37
6ENJ|1|a|G|38
6ENJ|1|a|G|39
*
6ENJ|1|a|C|403
6ENJ|1|a|G|404
6ENJ|1|a|U|405
6ENJ|1|a|G|406
6ENJ|1|a|U|407
6ENJ|1|a|A|408
6ENJ|1|a|U|409
6ENJ|1|a|G|410
6ENJ|1|a|A|411
6ENJ|1|a|A|412
6ENJ|1|a|G|413
6ENJ|1|a|A|414
6ENJ|1|a|A|415
6ENJ|1|a|G|416
*
6ENJ|1|a|U|427
6ENJ|1|a|G|428
6ENJ|1|a|U|429
6ENJ|1|a|A|430
6ENJ|1|a|A|431
6ENJ|1|a|A|432
6ENJ|1|a|G|433
6ENJ|1|a|U|434
6ENJ|1|a|A|435
6ENJ|1|a|C|436
6ENJ|1|a|U|437
6ENJ|1|a|U|438
6ENJ|1|a|U|439
6ENJ|1|a|C|440
6ENJ|1|a|A|441
6ENJ|1|a|G|442
6ENJ|1|a|C|443
6ENJ|1|a|G|444
*
6ENJ|1|a|C|490
6ENJ|1|a|G|491
6ENJ|1|a|C|492
6ENJ|1|a|A|493
6ENJ|1|a|G|494
6ENJ|1|a|A|495
6ENJ|1|a|A|496
6ENJ|1|a|G|497
6ENJ|1|a|A|498
6ENJ|1|a|A|499
6ENJ|1|a|G|500
6ENJ|1|a|C|501
*
6ENJ|1|a|G|544
6ENJ|1|a|C|545
6ENJ|1|a|A|546
6ENJ|1|a|A|547
6ENJ|1|a|G|548

Current chains

Chain a: 16S ribosomal RNA

Nearby chains

Chain d: 30S ribosomal protein S4
Chain l: 30S ribosomal protein S12

J5_6ENJ_007