J5_6FT6_006
3D structure
- PDB id
- 6FT6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the Nop53 pre-60S particle bound to the exosome nuclear cofactors
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- GGCACAUC*GAUGUCCUAAG*UUGAU*AC*GGC
- Length
- 29 nucleotides
- Bulged bases
- 6FT6|1|1|C|2654
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6FT6|1|1|G|2623
6FT6|1|1|G|2624
6FT6|1|1|C|2625
6FT6|1|1|A|2626
6FT6|1|1|C|2627
6FT6|1|1|A|2628
6FT6|1|1|U|2629
6FT6|1|1|C|2630
*
6FT6|1|1|G|2648
6FT6|1|1|A|2649
6FT6|1|1|U|2650
6FT6|1|1|G|2651
6FT6|1|1|U|2652
6FT6|1|1|C|2653
6FT6|1|1|C|2654
6FT6|1|1|U|2655
6FT6|1|1|A|2656
6FT6|1|1|A|2657
6FT6|1|1|G|2658
*
6FT6|1|1|U|2712
6FT6|1|1|U|2713
6FT6|1|1|G|2714
6FT6|1|1|A|2715
6FT6|1|1|U|2716
*
6FT6|1|1|A|2740
6FT6|1|1|C|2741
*
6FT6|1|1|G|2753
6FT6|1|1|G|2754
6FT6|1|1|C|2755
Current chains
- Chain 1
- 25S ribosomal RNA
Nearby chains
- Chain 5
- rRNA-processing protein CGR1
- Chain J
- 60S ribosomal protein L11-A
- Chain T
- 60S ribosomal protein L21-A
- Chain m
- Nucleolar GTP-binding protein 2
- Chain r
- Ribosome biogenesis protein NSA2
- Chain v
- Ribosome biogenesis protein RPF2
- Chain w
- Regulator of ribosome biosynthesis
- Chain x
- Ribosome assembly protein 4
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