J5_6GC7_002
3D structure
- PDB id
- 6GC7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 50S ribosomal subunit assembly intermediate state 1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.3 Å
Loop
- Sequence
- CAG*CGUACCU*AUGGG*CA*UG
- Length
- 19 nucleotides
- Bulged bases
- 6GC7|1|A|A|532, 6GC7|1|A|U|562
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6GC7|1|A|C|531
6GC7|1|A|A|532
6GC7|1|A|G|533
*
6GC7|1|A|C|560
6GC7|1|A|G|561
6GC7|1|A|U|562
6GC7|1|A|A|563
6GC7|1|A|C|564
6GC7|1|A|C|565
6GC7|1|A|U|566
*
6GC7|1|A|A|575
6GC7|1|A|U|576
6GC7|1|A|G|577
6GC7|1|A|G|578
6GC7|1|A|G|579
*
6GC7|1|A|C|1261
6GC7|1|A|A|1262
*
6GC7|1|A|U|2017
6GC7|1|A|G|2018
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain 0
- 50S ribosomal protein L32
- Chain E
- 50S ribosomal protein L4
- Chain L
- 50S ribosomal protein L15
- Chain Q
- 50S ribosomal protein L20
- Chain R
- 50S ribosomal protein L21
- Chain S
- 50S ribosomal protein L22
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