J5_6GZ5_011
3D structure
- PDB id
- 6GZ5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- tRNA translocation by the eukaryotic 80S ribosome and the impact of GTP hydrolysis, Translocation-intermediate-POST-3 (TI-POST-3)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- UG*CGAUGAAG*CGAACG*CG*UA
- Length
- 20 nucleotides
- Bulged bases
- 6GZ5|1|A3|U|38
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6GZ5|1|A2|U|20
6GZ5|1|A2|G|21
*
6GZ5|1|A3|C|35
6GZ5|1|A3|G|36
6GZ5|1|A3|A|37
6GZ5|1|A3|U|38
6GZ5|1|A3|G|39
6GZ5|1|A3|A|40
6GZ5|1|A3|A|41
6GZ5|1|A3|G|42
*
6GZ5|1|A3|C|101
6GZ5|1|A3|G|102
6GZ5|1|A3|A|103
6GZ5|1|A3|A|104
6GZ5|1|A3|C|105
6GZ5|1|A3|G|106
*
6GZ5|1|A3|C|113
6GZ5|1|A3|G|114
*
6GZ5|1|A3|U|136
6GZ5|1|A3|A|137
Current chains
- Chain A2
- 28S ribosomal RNA
- Chain A3
- 5.8S ribosomal RNA
Nearby chains
- Chain AN
- ribosomal protein eL15
- Chain AX
- ribosomal protein uL23
- Chain Ah
- ribosomal protein uL29
- Chain Aj
- ribosomal protein eL37
- Chain Al
- ribosomal protein eL39
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