J5_6I7V_005
3D structure
- PDB id
- 6I7V (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Ribosomal protein paralogs bL31 and bL36
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.9 Å
Loop
- Sequence
- CUGG*CGUG*CUUUCAG*CAGAAGAAG*CAAG
- Length
- 28 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J5_6I7V_005 not in the Motif Atlas
- Homologous match to J5_5J7L_002
- Geometric discrepancy: 0.0698
- The information below is about J5_5J7L_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J5_67416.1
- Basepair signature
- cWW-F-F-F-cWW-tHW-F-tHW-tSS-cWW-cHW-cWW-F-cWW-F-cWW-F-F
- Number of instances in this motif group
- 1
Unit IDs
6I7V|1|BA|C|36
6I7V|1|BA|U|37
6I7V|1|BA|G|38
6I7V|1|BA|G|39
*
6I7V|1|BA|C|403
6I7V|1|BA|G|404
6I7V|1|BA|U|405
6I7V|1|BA|G|406
*
6I7V|1|BA|C|436
6I7V|1|BA|U|437
6I7V|1|BA|U|438
6I7V|1|BA|U|439
6I7V|1|BA|C|440
6I7V|1|BA|A|441
6I7V|1|BA|G|442
*
6I7V|1|BA|C|492
6I7V|1|BA|A|493
6I7V|1|BA|G|494
6I7V|1|BA|A|495
6I7V|1|BA|A|496
6I7V|1|BA|G|497
6I7V|1|BA|A|498
6I7V|1|BA|A|499
6I7V|1|BA|G|500
*
6I7V|1|BA|C|545
6I7V|1|BA|A|546
6I7V|1|BA|A|547
6I7V|1|BA|G|548
Current chains
- Chain BA
- 16S ribosomal RNA
Nearby chains
- Chain BD
- 30S ribosomal protein S4
- Chain BL
- 30S ribosomal protein S12
- Chain DA
- Large subunit ribosomal RNA; LSU rRNA
- Chain DH
- 50S ribosomal protein L9
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