3D structure

PDB id
6I7V (explore in PDB, NAKB, or RNA 3D Hub)
Description
Ribosomal protein paralogs bL31 and bL36
Experimental method
X-RAY DIFFRACTION
Resolution
2.9 Å

Loop

Sequence
GAAAGACC*GGAUAACA*UCGAUGU*GUUUAG*CGGUCC
Length
35 nucleotides
Bulged bases
6I7V|1|CA|A|2062, 6I7V|1|CA|A|2448, 6I7V|1|CA|U|2449, 6I7V|1|CA|U|2609
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6I7V|1|CA|G|2057
6I7V|1|CA|A|2058
6I7V|1|CA|A|2059
6I7V|1|CA|A|2060
6I7V|1|CA|G|2061
6I7V|1|CA|A|2062
6I7V|1|CA|C|2063
6I7V|1|CA|C|2064
*
6I7V|1|CA|G|2446
6I7V|1|CA|G|2447
6I7V|1|CA|A|2448
6I7V|1|CA|U|2449
6I7V|1|CA|A|2450
6I7V|1|CA|A|2451
6I7V|1|CA|C|2452
6I7V|1|CA|A|2453
*
6I7V|1|CA|U|2500
6I7V|1|CA|C|2501
6I7V|1|CA|G|2502
6I7V|1|CA|A|2503
6I7V|1|CA|U|2504
6I7V|1|CA|G|2505
6I7V|1|CA|U|2506
*
6I7V|1|CA|G|2583
6I7V|1|CA|U|2584
6I7V|1|CA|U|2585
6I7V|1|CA|U|2586
6I7V|1|CA|A|2587
6I7V|1|CA|G|2588
*
6I7V|1|CA|C|2606
6I7V|1|CA|G|2607
6I7V|1|CA|G|2608
6I7V|1|CA|U|2609
6I7V|1|CA|C|2610
6I7V|1|CA|C|2611

Current chains

Chain CA
23S ribsomal RNA

Nearby chains

Chain C1
50S ribosomal protein L32
Chain CC
50S ribosomal protein L2
Chain CD
50S ribosomal protein L3
Chain CE
50S ribosomal protein L4
Chain CM
50S ribosomal protein L15
Chain CN
50S ribosomal protein L16
Chain CT
50S ribosomal protein L22

Coloring options:

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