J5_6I9R_001
3D structure
- PDB id
- 6I9R (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Large subunit of the human mitochondrial ribosome in complex with Virginiamycin M and Quinupristin
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- CUAGAAAUAAC*GACCC*GUUG*CCAAU*AAGAACUAAUG
- Length
- 36 nucleotides
- Bulged bases
- 6I9R|1|A|A|1869, 6I9R|1|A|G|2292, 6I9R|1|A|U|2299
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6I9R|1|A|C|1865
6I9R|1|A|U|1866
6I9R|1|A|A|1867
6I9R|1|A|G|1868
6I9R|1|A|A|1869
6I9R|1|A|A|1870
6I9R|1|A|A|1871
6I9R|1|A|U|1872
6I9R|1|A|A|1873
6I9R|1|A|A|1874
6I9R|1|A|C|1875
*
6I9R|1|A|G|1899
6I9R|1|A|A|1900
6I9R|1|A|C|1901
6I9R|1|A|C|1902
6I9R|1|A|C|1903
*
6I9R|1|A|G|2019
6I9R|1|A|U|2020
6I9R|1|A|U|2021
6I9R|1|A|G|2022
*
6I9R|1|A|C|2271
6I9R|1|A|C|2272
6I9R|1|A|A|2273
6I9R|1|A|A|2274
6I9R|1|A|U|2275
*
6I9R|1|A|A|2290
6I9R|1|A|A|2291
6I9R|1|A|G|2292
6I9R|1|A|A|2293
6I9R|1|A|A|2294
6I9R|1|A|C|2295
6I9R|1|A|U|2296
6I9R|1|A|A|2297
6I9R|1|A|A|2298
6I9R|1|A|U|2299
6I9R|1|A|G|2300
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain 3
- 39S ribosomal protein L35, mitochondrial
- Chain F
- 39S ribosomal protein L4, mitochondrial
- Chain M
- 39S ribosomal protein L15, mitochondrial
- Chain R
- 39S ribosomal protein L20, mitochondrial
- Chain S
- 39S ribosomal protein L21, mitochondrial
- Chain b
- 39S ribosomal protein L43, mitochondrial
- Chain c
- 39S ribosomal protein L44, mitochondrial
- Chain g
- 39S ribosomal protein L49, mitochondrial
- Chain i
- 39S ribosomal protein L51, mitochondrial
Coloring options: