J5_6KE6_003
3D structure
- PDB id
- 6KE6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 3.4 angstrom cryo-EM structure of yeast 90S small subunit preribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- CUUGU*AAAUAAC*GGAAUGAG*CGAGGAACAAU*AUAG
- Length
- 35 nucleotides
- Bulged bases
- 6KE6|1|SA|G|539
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6KE6|1|SA|C|31
6KE6|1|SA|U|32
6KE6|1|SA|U|33
6KE6|1|SA|G|34
6KE6|1|SA|U|35
*
6KE6|1|SA|A|473
6KE6|1|SA|A|474
6KE6|1|SA|A|475
6KE6|1|SA|U|476
6KE6|1|SA|A|477
6KE6|1|SA|A|478
6KE6|1|SA|C|479
*
6KE6|1|SA|G|509
6KE6|1|SA|G|510
6KE6|1|SA|A|511
6KE6|1|SA|A|512
6KE6|1|SA|U|513
6KE6|1|SA|G|514
6KE6|1|SA|A|515
6KE6|1|SA|G|516
*
6KE6|1|SA|C|536
6KE6|1|SA|G|537
6KE6|1|SA|A|538
6KE6|1|SA|G|539
6KE6|1|SA|G|540
6KE6|1|SA|A|541
6KE6|1|SA|A|542
6KE6|1|SA|C|543
6KE6|1|SA|A|544
6KE6|1|SA|A|545
6KE6|1|SA|U|546
*
6KE6|1|SA|A|592
6KE6|1|SA|U|593
6KE6|1|SA|A|594
6KE6|1|SA|G|595
Current chains
- Chain SA
- 18S rRNA
Nearby chains
- Chain 5H
- Something about silencing protein 10
- Chain RB
- U3 small nucleolar ribonucleoprotein protein LCP5
- Chain RJ
- Ribosome biogenesis protein BMS1
- Chain SK
- 40S ribosomal protein S9-A
- Chain SY
- 40S ribosomal protein S23-A
Coloring options: