J5_6MTC_007
3D structure
- PDB id
- 6MTC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S ribosome with Z-site tRNA and IFRD2 (unrotated state)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- CUUGU*AAAUAAC*GGAAUGAG*CGAGGAUCCAU*AUA(OMG)
- Length
- 35 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: OMG
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6MTC|1|9|C|30
6MTC|1|9|U|31
6MTC|1|9|U|32
6MTC|1|9|G|33
6MTC|1|9|U|34
*
6MTC|1|9|A|521
6MTC|1|9|A|522
6MTC|1|9|A|523
6MTC|1|9|U|524
6MTC|1|9|A|525
6MTC|1|9|A|526
6MTC|1|9|C|527
*
6MTC|1|9|G|558
6MTC|1|9|G|559
6MTC|1|9|A|560
6MTC|1|9|A|561
6MTC|1|9|U|562
6MTC|1|9|G|563
6MTC|1|9|A|564
6MTC|1|9|G|565
*
6MTC|1|9|C|585
6MTC|1|9|G|586
6MTC|1|9|A|587
6MTC|1|9|G|588
6MTC|1|9|G|589
6MTC|1|9|A|590
6MTC|1|9|U|591
6MTC|1|9|C|592
6MTC|1|9|C|593
6MTC|1|9|A|594
6MTC|1|9|U|595
*
6MTC|1|9|A|641
6MTC|1|9|U|642
6MTC|1|9|A|643
6MTC|1|9|OMG|644
Current chains
- Chain 9
- 18S rRNA
Nearby chains
- Chain JJ
- 40S ribosomal protein S9
- Chain XX
- 40S ribosomal protein S23
- Chain ee
- 40S ribosomal protein S30
Coloring options: