J5_6MTE_009
3D structure
- PDB id
- 6MTE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S ribosome with eEF2 and SERBP1 (rotated state)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- CAUG*CGAAUGGC*GAG*CACAU*AAGGCAG
- Length
- 27 nucleotides
- Bulged bases
- 6MTE|1|9|U|55, 6MTE|1|9|A|92, 6MTE|1|9|C|472
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6MTE|1|9|C|53
6MTE|1|9|A|54
6MTE|1|9|U|55
6MTE|1|9|G|56
*
6MTE|1|9|C|89
6MTE|1|9|G|90
6MTE|1|9|A|91
6MTE|1|9|A|92
6MTE|1|9|U|93
6MTE|1|9|G|94
6MTE|1|9|G|95
6MTE|1|9|C|96
*
6MTE|1|9|G|434
6MTE|1|9|A|435
6MTE|1|9|G|436
*
6MTE|1|9|C|457
6MTE|1|9|A|458
6MTE|1|9|C|459
6MTE|1|9|A|460
6MTE|1|9|U|461
*
6MTE|1|9|A|468
6MTE|1|9|A|469
6MTE|1|9|G|470
6MTE|1|9|G|471
6MTE|1|9|C|472
6MTE|1|9|A|473
6MTE|1|9|G|474
Current chains
- Chain 9
- 18S rRNA
Nearby chains
- Chain EE
- eS4
- Chain GG
- eS6
- Chain II
- eS8
- Chain JJ
- uS4
- Chain V
- uL14
- Chain YY
- eS24
Coloring options: