J5_6N8O_004
3D structure
- PDB id
- 6N8O (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of Rpl10-inserted (RI) pre-60S ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- GGUUC*GGUUAGUCGAUC*GGAAU*AACC*GGUCGUAC
- Length
- 34 nucleotides
- Bulged bases
- 6N8O|1|A|U|1523
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6N8O|1|A|G|1492
6N8O|1|A|G|1493
6N8O|1|A|U|1494
6N8O|1|A|U|1495
6N8O|1|A|C|1496
*
6N8O|1|A|G|1520
6N8O|1|A|G|1521
6N8O|1|A|U|1522
6N8O|1|A|U|1523
6N8O|1|A|A|1524
6N8O|1|A|G|1525
6N8O|1|A|U|1526
6N8O|1|A|C|1527
6N8O|1|A|G|1528
6N8O|1|A|A|1529
6N8O|1|A|U|1530
6N8O|1|A|C|1531
*
6N8O|1|A|G|1591
6N8O|1|A|G|1592
6N8O|1|A|A|1593
6N8O|1|A|A|1594
6N8O|1|A|U|1595
*
6N8O|1|A|A|1612
6N8O|1|A|A|1613
6N8O|1|A|C|1614
6N8O|1|A|C|1615
*
6N8O|1|A|G|1829
6N8O|1|A|G|1830
6N8O|1|A|U|1831
6N8O|1|A|C|1832
6N8O|1|A|G|1833
6N8O|1|A|U|1834
6N8O|1|A|A|1835
6N8O|1|A|C|1836
Current chains
- Chain A
- Saccharomyces cerevisiae S288C 35S pre-ribosomal RNA (RDN37-1), miscRNA
Nearby chains
- Chain C
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain e
- 60S ribosomal protein L19-A
- Chain k
- 60S ribosomal protein L25
- Chain t
- 60S ribosomal protein L34-A
- Chain w
- 60S ribosomal protein L37-A
- Chain x
- 60S ribosomal protein L38
- Chain y
- 60S ribosomal protein L39
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