J5_6N9F_009
3D structure
- PDB id
- 6N9F (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in complex with a short substrate mimic ACCA-DPhe and bound to mRNA and P-site tRNA at 3.7A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.7 Å
Loop
- Sequence
- GCAAG*CGGACGGG*CAG*CAC*GGCAGC
- Length
- 25 nucleotides
- Bulged bases
- 6N9F|1|1a|A|109
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6N9F|1|1a|G|57
6N9F|1|1a|C|58
6N9F|1|1a|A|59
6N9F|1|1a|A|60
6N9F|1|1a|G|61
*
6N9F|1|1a|C|106
6N9F|1|1a|G|107
6N9F|1|1a|G|108
6N9F|1|1a|A|109
6N9F|1|1a|C|110
6N9F|1|1a|G|111
6N9F|1|1a|G|112
6N9F|1|1a|G|113
*
6N9F|1|1a|C|314
6N9F|1|1a|A|315
6N9F|1|1a|G|316
*
6N9F|1|1a|C|337
6N9F|1|1a|A|338
6N9F|1|1a|C|339
*
6N9F|1|1a|G|350
6N9F|1|1a|G|351
6N9F|1|1a|C|352
6N9F|1|1a|A|353
6N9F|1|1a|G|354
6N9F|1|1a|C|355
Current chains
- Chain 1a
- 16S Ribosomal RNA
Nearby chains
- Chain 1O
- 50S Ribosomal Protein L14
- Chain 1T
- 50S Ribosomal Protein L19
- Chain 1p
- 30S ribosomal protein S16
- Chain 1t
- 30S Ribosomal Protein S20
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