J5_6NWY_002

3D structure

PDB id

6NWY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Modified tRNA(Pro) bound to Thermus thermophilus 70S (near-cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

CAAG*CGGACGGGU*ACAG*CAC*GGCAG

Length

25 nucleotides

Bulged bases

6NWY|1|QA|A|109, 6NWY|1|QA|C|352

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6NWY|1|QA|C|58
6NWY|1|QA|A|59
6NWY|1|QA|A|60
6NWY|1|QA|G|61
*
6NWY|1|QA|C|106
6NWY|1|QA|G|107
6NWY|1|QA|G|108
6NWY|1|QA|A|109
6NWY|1|QA|C|110
6NWY|1|QA|G|111
6NWY|1|QA|G|112
6NWY|1|QA|G|113
6NWY|1|QA|U|114
*
6NWY|1|QA|A|313
6NWY|1|QA|C|314
6NWY|1|QA|A|315
6NWY|1|QA|G|316
*
6NWY|1|QA|C|337
6NWY|1|QA|A|338
6NWY|1|QA|C|339
*
6NWY|1|QA|G|350
6NWY|1|QA|G|351
6NWY|1|QA|C|352
6NWY|1|QA|A|353
6NWY|1|QA|G|354

Current chains

Chain QA

16S rRNA

Nearby chains

Chain QP

30S ribosomal protein S16

Chain QT

30S ribosomal protein S20

Chain RO

50S ribosomal protein L14

Chain RT

50S ribosomal protein L19