J5_6NWY_009
3D structure
- PDB id
- 6NWY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Modified tRNA(Pro) bound to Thermus thermophilus 70S (near-cognate)
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.5 Å
Loop
- Sequence
- ACGAAAAGACC*GGAUAACA*UCGAUGUC*GGUUCAG*CGGUCUCUAU
- Length
- 44 nucleotides
- Bulged bases
- 6NWY|1|RA|C|2055, 6NWY|1|RA|A|2062, 6NWY|1|RA|A|2448, 6NWY|1|RA|U|2506, 6NWY|1|RA|U|2609, 6NWY|1|RA|C|2612, 6NWY|1|RA|U|2613, 6NWY|1|RA|A|2614
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6NWY|1|RA|A|2054
6NWY|1|RA|C|2055
6NWY|1|RA|G|2056
6NWY|1|RA|A|2057
6NWY|1|RA|A|2058
6NWY|1|RA|A|2059
6NWY|1|RA|A|2060
6NWY|1|RA|G|2061
6NWY|1|RA|A|2062
6NWY|1|RA|C|2063
6NWY|1|RA|C|2064
*
6NWY|1|RA|G|2446
6NWY|1|RA|G|2447
6NWY|1|RA|A|2448
6NWY|1|RA|U|2449
6NWY|1|RA|A|2450
6NWY|1|RA|A|2451
6NWY|1|RA|C|2452
6NWY|1|RA|A|2453
*
6NWY|1|RA|U|2500
6NWY|1|RA|C|2501
6NWY|1|RA|G|2502
6NWY|1|RA|A|2503
6NWY|1|RA|U|2504
6NWY|1|RA|G|2505
6NWY|1|RA|U|2506
6NWY|1|RA|C|2507
*
6NWY|1|RA|G|2582
6NWY|1|RA|G|2583
6NWY|1|RA|U|2584
6NWY|1|RA|U|2585
6NWY|1|RA|C|2586
6NWY|1|RA|A|2587
6NWY|1|RA|G|2588
*
6NWY|1|RA|C|2606
6NWY|1|RA|G|2607
6NWY|1|RA|G|2608
6NWY|1|RA|U|2609
6NWY|1|RA|C|2610
6NWY|1|RA|U|2611
6NWY|1|RA|C|2612
6NWY|1|RA|U|2613
6NWY|1|RA|A|2614
6NWY|1|RA|U|2615
Current chains
- Chain RA
- 23S rRNA
Nearby chains
- Chain R0
- 50S ribosomal protein L27
- Chain R5
- 50S ribosomal protein L32
- Chain RD
- 50S ribosomal protein L2
- Chain RE
- 50S ribosomal protein L3
- Chain RF
- 50S ribosomal protein L4
- Chain RP
- 50S ribosomal protein L15
- Chain RW
- 50S ribosomal protein L22
Coloring options: