J5_6NWY_014
3D structure
- PDB id
- 6NWY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Modified tRNA(Pro) bound to Thermus thermophilus 70S (near-cognate)
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.5 Å
Loop
- Sequence
- CUAAACC*GGGGUCGUG*CGAGUAC*GGAAUCUG*UAAG
- Length
- 35 nucleotides
- Bulged bases
- 6NWY|1|YA|U|271|||D, 6NWY|1|YA|U|405
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6NWY|1|YA|C|268
6NWY|1|YA|U|269
6NWY|1|YA|A|270|||A
6NWY|1|YA|A|270|||B
6NWY|1|YA|A|270|||C
6NWY|1|YA|C|270|||D
6NWY|1|YA|C|270|||E
*
6NWY|1|YA|G|270|||W
6NWY|1|YA|G|270|||X
6NWY|1|YA|G|270|||Y
6NWY|1|YA|G|270|||Z
6NWY|1|YA|U|271|||A
6NWY|1|YA|C|271|||B
6NWY|1|YA|G|271|||C
6NWY|1|YA|U|271|||D
6NWY|1|YA|G|271|||E
*
6NWY|1|YA|C|366
6NWY|1|YA|G|370
6NWY|1|YA|A|371
6NWY|1|YA|G|372
6NWY|1|YA|U|373
6NWY|1|YA|A|374
6NWY|1|YA|C|375
*
6NWY|1|YA|G|399
6NWY|1|YA|G|400
6NWY|1|YA|A|401
6NWY|1|YA|A|402
6NWY|1|YA|U|403
6NWY|1|YA|C|404
6NWY|1|YA|U|405
6NWY|1|YA|G|406
*
6NWY|1|YA|U|421
6NWY|1|YA|A|422
6NWY|1|YA|A|423
6NWY|1|YA|G|424
Current chains
- Chain YA
- 23S rRNA
Nearby chains
- Chain Y1
- 50S ribosomal protein L28
- Chain YI
- 50S ribosomal protein L9
Coloring options: