3D structure

PDB id
6O3M (explore in PDB, NAKB, or RNA 3D Hub)
Description
Unmodified tRNA(Pro) bound to Thermus thermophilus 70S (cognate)
Experimental method
X-RAY DIFFRACTION
Resolution
3.97 Å

Loop

Sequence
AAAAGACC*GGAUAACA*UCGAUGUC*GGUUCAG*CGGUCU
Length
37 nucleotides
Bulged bases
6O3M|1|RA|A|2062, 6O3M|1|RA|A|2448, 6O3M|1|RA|U|2449, 6O3M|1|RA|U|2609
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6O3M|1|RA|A|2057
6O3M|1|RA|A|2058
6O3M|1|RA|A|2059
6O3M|1|RA|A|2060
6O3M|1|RA|G|2061
6O3M|1|RA|A|2062
6O3M|1|RA|C|2063
6O3M|1|RA|C|2064
*
6O3M|1|RA|G|2446
6O3M|1|RA|G|2447
6O3M|1|RA|A|2448
6O3M|1|RA|U|2449
6O3M|1|RA|A|2450
6O3M|1|RA|A|2451
6O3M|1|RA|C|2452
6O3M|1|RA|A|2453
*
6O3M|1|RA|U|2500
6O3M|1|RA|C|2501
6O3M|1|RA|G|2502
6O3M|1|RA|A|2503
6O3M|1|RA|U|2504
6O3M|1|RA|G|2505
6O3M|1|RA|U|2506
6O3M|1|RA|C|2507
*
6O3M|1|RA|G|2582
6O3M|1|RA|G|2583
6O3M|1|RA|U|2584
6O3M|1|RA|U|2585
6O3M|1|RA|C|2586
6O3M|1|RA|A|2587
6O3M|1|RA|G|2588
*
6O3M|1|RA|C|2606
6O3M|1|RA|G|2607
6O3M|1|RA|G|2608
6O3M|1|RA|U|2609
6O3M|1|RA|C|2610
6O3M|1|RA|U|2611

Current chains

Chain RA
23S rRNA

Nearby chains

Chain QV
Transfer RNA; tRNA
Chain R0
50S ribosomal protein L27
Chain R5
50S ribosomal protein L32
Chain RD
50S ribosomal protein L2
Chain RE
50S ribosomal protein L3
Chain RF
50S ribosomal protein L4
Chain RP
50S ribosomal protein L15
Chain RW
50S ribosomal protein L22

Coloring options:

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