J5_6O97_014

3D structure

PDB id

6O97 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with propylamycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.75A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.75 Å

Loop

Sequence

CGAG*CGUAG*CGAG*CGCAAGC*GCAAAG

Length

26 nucleotides

Bulged bases

6O97|1|2A|A|652|||B

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6O97|1|2A|C|601
6O97|1|2A|G|602
6O97|1|2A|A|603
6O97|1|2A|G|604
*
6O97|1|2A|C|624
6O97|1|2A|G|625
6O97|1|2A|U|626
6O97|1|2A|A|627
6O97|1|2A|G|628
*
6O97|1|2A|C|635
6O97|1|2A|G|636
6O97|1|2A|A|637
6O97|1|2A|G|638
*
6O97|1|2A|C|650
6O97|1|2A|G|651
6O97|1|2A|C|652
6O97|1|2A|A|652|||A
6O97|1|2A|A|652|||B
6O97|1|2A|G|652|||C
6O97|1|2A|C|652|||D
*
6O97|1|2A|G|652|||U
6O97|1|2A|C|652|||V
6O97|1|2A|A|653
6O97|1|2A|A|654
6O97|1|2A|A|655
6O97|1|2A|G|656

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains

Chain 28

50S ribosomal protein L35

Chain 2F

50S ribosomal protein L4

Chain 2P

50S ribosomal protein L15