J5_6O9K_001

3D structure

PDB id

6O9K (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S initiation complex

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

GCGAUGAAG*CGAAUG*CA*UAU*AGGC

Length

24 nucleotides

Bulged bases

6O9K|1|A|U|50

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6O9K|1|A|G|46
6O9K|1|A|C|47
6O9K|1|A|G|48
6O9K|1|A|A|49
6O9K|1|A|U|50
6O9K|1|A|G|51
6O9K|1|A|A|52
6O9K|1|A|A|53
6O9K|1|A|G|54
*
6O9K|1|A|C|116
6O9K|1|A|G|117
6O9K|1|A|A|118
6O9K|1|A|A|119
6O9K|1|A|U|120
6O9K|1|A|G|121
*
6O9K|1|A|C|130
6O9K|1|A|A|131
*
6O9K|1|A|U|148
6O9K|1|A|A|149
6O9K|1|A|U|150
*
6O9K|1|A|A|176
6O9K|1|A|G|177
6O9K|1|A|G|178
6O9K|1|A|C|179

Current chains

Chain A

23S rRNA

Nearby chains

Chain 7

50S ribosomal protein L34