J5_6O9K_005
3D structure
- PDB id
- 6O9K (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S initiation complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4 Å
Loop
- Sequence
- GAAAGACC*GGAUAACAG*CCUCGAUGUC*GGUUUAG*CGGUCC
- Length
- 40 nucleotides
- Bulged bases
- 6O9K|1|A|A|2062, 6O9K|1|A|A|2448, 6O9K|1|A|U|2449, 6O9K|1|A|U|2585, 6O9K|1|A|U|2609
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6O9K|1|A|G|2057
6O9K|1|A|A|2058
6O9K|1|A|A|2059
6O9K|1|A|A|2060
6O9K|1|A|G|2061
6O9K|1|A|A|2062
6O9K|1|A|C|2063
6O9K|1|A|C|2064
*
6O9K|1|A|G|2446
6O9K|1|A|G|2447
6O9K|1|A|A|2448
6O9K|1|A|U|2449
6O9K|1|A|A|2450
6O9K|1|A|A|2451
6O9K|1|A|C|2452
6O9K|1|A|A|2453
6O9K|1|A|G|2454
*
6O9K|1|A|C|2498
6O9K|1|A|C|2499
6O9K|1|A|U|2500
6O9K|1|A|C|2501
6O9K|1|A|G|2502
6O9K|1|A|A|2503
6O9K|1|A|U|2504
6O9K|1|A|G|2505
6O9K|1|A|U|2506
6O9K|1|A|C|2507
*
6O9K|1|A|G|2582
6O9K|1|A|G|2583
6O9K|1|A|U|2584
6O9K|1|A|U|2585
6O9K|1|A|U|2586
6O9K|1|A|A|2587
6O9K|1|A|G|2588
*
6O9K|1|A|C|2606
6O9K|1|A|G|2607
6O9K|1|A|G|2608
6O9K|1|A|U|2609
6O9K|1|A|C|2610
6O9K|1|A|C|2611
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 4
- 50S ribosomal protein L3
- Chain 5
- 50S ribosomal protein L32
- Chain 9
- 50S ribosomal protein L2
- Chain E
- 50S ribosomal protein L4
- Chain L
- 50S ribosomal protein L15
- Chain M
- 50S ribosomal protein L16
- Chain S
- 50S ribosomal protein L22
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