J5_6OLG_003
3D structure
- PDB id
- 6OLG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human ribosome nascent chain complex stalled by a drug-like small molecule (CDH1_RNC with PP tRNA)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- GGAGUC*GGAC*GUUC*GCC*GCAGAUC
- Length
- 24 nucleotides
- Bulged bases
- 6OLG|1|A2|C|2268, 6OLG|1|A2|U|2329
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6OLG|1|A2|G|1318
6OLG|1|A2|G|1319
6OLG|1|A2|A|1320
6OLG|1|A2|G|1321
6OLG|1|A2|U|1322
6OLG|1|A2|C|1323
*
6OLG|1|A2|G|1498
6OLG|1|A2|G|1499
6OLG|1|A2|A|1500
6OLG|1|A2|C|1501
*
6OLG|1|A2|G|1640
6OLG|1|A2|U|1641
6OLG|1|A2|U|1642
6OLG|1|A2|C|1643
*
6OLG|1|A2|G|2267
6OLG|1|A2|C|2268
6OLG|1|A2|C|2269
*
6OLG|1|A2|G|2324
6OLG|1|A2|C|2325
6OLG|1|A2|A|2326
6OLG|1|A2|G|2327
6OLG|1|A2|A|2328
6OLG|1|A2|U|2329
6OLG|1|A2|C|2330
Current chains
- Chain A2
- 28S ribosomal RNA
Nearby chains
- Chain A3
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain AC
- 60S ribosomal protein L4
- Chain AL
- 60S ribosomal protein L13
- Chain AN
- 60S ribosomal protein L15
- Chain Aa
- 60S ribosomal protein L27a
- Chain Ae
- 60S ribosomal protein L32
- Chain At
- 60S ribosomal protein L28
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