J5_6OLZ_012
3D structure
- PDB id
- 6OLZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with PP tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- AGAAGACC*GGAUAACUG*CUUCGAUGUC*GGUUUAG*UAGUUU
- Length
- 40 nucleotides
- Bulged bases
- 6OLZ|1|A2|A|3879, 6OLZ|1|A2|A|4356, 6OLZ|1|A2|G|4413, 6OLZ|1|A2|U|4414, 6OLZ|1|A2|U|4517, 6OLZ|1|A2|U|4518
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6OLZ|1|A2|A|3874
6OLZ|1|A2|G|3875
6OLZ|1|A2|A|3876
6OLZ|1|A2|A|3877
6OLZ|1|A2|G|3878
6OLZ|1|A2|A|3879
6OLZ|1|A2|C|3880
6OLZ|1|A2|C|3881
*
6OLZ|1|A2|G|4354
6OLZ|1|A2|G|4355
6OLZ|1|A2|A|4356
6OLZ|1|A2|U|4357
6OLZ|1|A2|A|4358
6OLZ|1|A2|A|4359
6OLZ|1|A2|C|4360
6OLZ|1|A2|U|4361
6OLZ|1|A2|G|4362
*
6OLZ|1|A2|C|4406
6OLZ|1|A2|U|4407
6OLZ|1|A2|U|4408
6OLZ|1|A2|C|4409
6OLZ|1|A2|G|4410
6OLZ|1|A2|A|4411
6OLZ|1|A2|U|4412
6OLZ|1|A2|G|4413
6OLZ|1|A2|U|4414
6OLZ|1|A2|C|4415
*
6OLZ|1|A2|G|4490
6OLZ|1|A2|G|4491
6OLZ|1|A2|U|4492
6OLZ|1|A2|U|4493
6OLZ|1|A2|U|4494
6OLZ|1|A2|A|4495
6OLZ|1|A2|G|4496
*
6OLZ|1|A2|U|4514
6OLZ|1|A2|A|4515
6OLZ|1|A2|G|4516
6OLZ|1|A2|U|4517
6OLZ|1|A2|U|4518
6OLZ|1|A2|U|4519
Current chains
- Chain A2
- 28S ribosomal RNA
Nearby chains
- Chain A
- Proprotein convertase subtilisin/kexin type 9
- Chain AA
- 60S ribosomal protein L8
- Chain AB
- 60S ribosomal protein L3
- Chain AC
- 60S ribosomal protein L4
- Chain AI
- 60S ribosomal protein L10
- Chain AP
- 60S ribosomal protein L17
- Chain Ab
- 60S ribosomal protein L29
- Chain Bv
- Transfer RNA; tRNA
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