J5_6OLZ_017
3D structure
- PDB id
- 6OLZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with PP tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- AUCUUGG*CCCUUGCCUCUC*GAAGCGUU*AUGGAAUAGGACCGC*GAGGCCAUGAU
- Length
- 53 nucleotides
- Bulged bases
- 6OLZ|1|B1|C|741, 6OLZ|1|B1|U|743, 6OLZ|1|B1|G|798, 6OLZ|1|B1|U|871, 6OLZ|1|B1|G|873, 6OLZ|1|B1|A|913
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6OLZ|1|B1|A|685
6OLZ|1|B1|U|686
6OLZ|1|B1|C|687
6OLZ|1|B1|U|688
6OLZ|1|B1|U|689
6OLZ|1|B1|G|690
6OLZ|1|B1|G|691
*
6OLZ|1|B1|C|739
6OLZ|1|B1|C|740
6OLZ|1|B1|C|741
6OLZ|1|B1|U|742
6OLZ|1|B1|U|743
6OLZ|1|B1|G|744
6OLZ|1|B1|C|745
6OLZ|1|B1|C|746
6OLZ|1|B1|U|747
6OLZ|1|B1|C|748
6OLZ|1|B1|U|749
6OLZ|1|B1|C|750
*
6OLZ|1|B1|G|793
6OLZ|1|B1|A|794
6OLZ|1|B1|A|795
6OLZ|1|B1|G|796
6OLZ|1|B1|C|797
6OLZ|1|B1|G|798
6OLZ|1|B1|U|799
6OLZ|1|B1|U|800
*
6OLZ|1|B1|A|865
6OLZ|1|B1|U|866
6OLZ|1|B1|G|867
6OLZ|1|B1|G|868
6OLZ|1|B1|A|869
6OLZ|1|B1|A|870
6OLZ|1|B1|U|871
6OLZ|1|B1|A|872
6OLZ|1|B1|G|873
6OLZ|1|B1|G|874
6OLZ|1|B1|A|875
6OLZ|1|B1|C|876
6OLZ|1|B1|C|877
6OLZ|1|B1|G|878
6OLZ|1|B1|C|879
*
6OLZ|1|B1|G|907
6OLZ|1|B1|A|908
6OLZ|1|B1|G|909
6OLZ|1|B1|G|910
6OLZ|1|B1|C|911
6OLZ|1|B1|C|912
6OLZ|1|B1|A|913
6OLZ|1|B1|U|914
6OLZ|1|B1|G|915
6OLZ|1|B1|A|916
6OLZ|1|B1|U|917
Current chains
- Chain B1
- 18S ribosomal RNA
Nearby chains
- Chain AR
- 60S ribosomal protein L19
- Chain BE
- 40S ribosomal protein S4, Y isoform 1
- Chain BG
- 40S ribosomal protein S6
- Chain BH
- 40S ribosomal protein S7
- Chain BL
- 40S ribosomal protein S11
- Chain BN
- 40S ribosomal protein S13
- Chain BW
- 40S ribosomal protein S15a
- Chain BX
- 40S ribosomal protein S23
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