J5_6ORL_007

3D structure

PDB id

6ORL (explore in PDB, NAKB, or RNA 3D Hub)

Description

RF1 pre-accommodated 70S complex at 24 ms

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CUGG*CGUG*CUUUC*GAAG*CAAG

Length

21 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6ORL|1|2|C|36
6ORL|1|2|U|37
6ORL|1|2|G|38
6ORL|1|2|G|39
*
6ORL|1|2|C|403
6ORL|1|2|G|404
6ORL|1|2|U|405
6ORL|1|2|G|406
*
6ORL|1|2|C|436
6ORL|1|2|U|437
6ORL|1|2|U|438
6ORL|1|2|U|439
6ORL|1|2|C|440
*
6ORL|1|2|G|497
6ORL|1|2|A|498
6ORL|1|2|A|499
6ORL|1|2|G|500
*
6ORL|1|2|C|545
6ORL|1|2|A|546
6ORL|1|2|A|547
6ORL|1|2|G|548

Current chains

Chain 2

16S ribosomal RNA

Nearby chains

Chain i

30S ribosomal protein S4

Chain q

30S ribosomal protein S12