J5_6OSI_020

3D structure

PDB id

6OSI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Unmodified tRNA(Pro) bound to Thermus thermophilus 70S (near cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

4.14 Å

Loop

Sequence

CGAG*CGUAG*CGAG*CGCAAG*CAAAG

Length

24 nucleotides

Bulged bases

6OSI|1|RA|A|653, 6OSI|1|RA|A|654|||A

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6OSI|1|RA|C|601
6OSI|1|RA|G|602
6OSI|1|RA|A|603
6OSI|1|RA|G|604
*
6OSI|1|RA|C|624
6OSI|1|RA|G|625
6OSI|1|RA|U|626
6OSI|1|RA|A|627
6OSI|1|RA|G|628
*
6OSI|1|RA|C|635
6OSI|1|RA|G|636
6OSI|1|RA|A|637
6OSI|1|RA|G|638
*
6OSI|1|RA|C|650
6OSI|1|RA|G|651
6OSI|1|RA|C|652
6OSI|1|RA|A|653
6OSI|1|RA|A|654|||A
6OSI|1|RA|G|654|||B
*
6OSI|1|RA|C|654|||U
6OSI|1|RA|A|654|||V
6OSI|1|RA|A|654|||W
6OSI|1|RA|A|655
6OSI|1|RA|G|656

Current chains

Chain RA

23S rRNA

Nearby chains

Chain R8

50S ribosomal protein L35

Chain RF

50S ribosomal protein L4

Chain RP

50S ribosomal protein L15