J5_6OSI_022
3D structure
- PDB id
- 6OSI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Unmodified tRNA(Pro) bound to Thermus thermophilus 70S (near cognate)
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 4.14 Å
Loop
- Sequence
- CAGGACGAAAAGACC*GGAUAACA*UCGAUGU*GUUCAG*CGGUCUCUAUCCG
- Length
- 49 nucleotides
- Bulged bases
- 6OSI|1|YA|C|2055, 6OSI|1|YA|A|2060, 6OSI|1|YA|A|2062, 6OSI|1|YA|A|2448, 6OSI|1|YA|G|2502, 6OSI|1|YA|U|2609, 6OSI|1|YA|C|2612, 6OSI|1|YA|U|2613
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6OSI|1|YA|C|2050
6OSI|1|YA|A|2051
6OSI|1|YA|G|2052
6OSI|1|YA|G|2053
6OSI|1|YA|A|2054
6OSI|1|YA|C|2055
6OSI|1|YA|G|2056
6OSI|1|YA|A|2057
6OSI|1|YA|A|2058
6OSI|1|YA|A|2059
6OSI|1|YA|A|2060
6OSI|1|YA|G|2061
6OSI|1|YA|A|2062
6OSI|1|YA|C|2063
6OSI|1|YA|C|2064
*
6OSI|1|YA|G|2446
6OSI|1|YA|G|2447
6OSI|1|YA|A|2448
6OSI|1|YA|U|2449
6OSI|1|YA|A|2450
6OSI|1|YA|A|2451
6OSI|1|YA|C|2452
6OSI|1|YA|A|2453
*
6OSI|1|YA|U|2500
6OSI|1|YA|C|2501
6OSI|1|YA|G|2502
6OSI|1|YA|A|2503
6OSI|1|YA|U|2504
6OSI|1|YA|G|2505
6OSI|1|YA|U|2506
*
6OSI|1|YA|G|2583
6OSI|1|YA|U|2584
6OSI|1|YA|U|2585
6OSI|1|YA|C|2586
6OSI|1|YA|A|2587
6OSI|1|YA|G|2588
*
6OSI|1|YA|C|2606
6OSI|1|YA|G|2607
6OSI|1|YA|G|2608
6OSI|1|YA|U|2609
6OSI|1|YA|C|2610
6OSI|1|YA|U|2611
6OSI|1|YA|C|2612
6OSI|1|YA|U|2613
6OSI|1|YA|A|2614
6OSI|1|YA|U|2615
6OSI|1|YA|C|2616
6OSI|1|YA|C|2617
6OSI|1|YA|G|2618
Current chains
- Chain YA
- 23S rRNA
Nearby chains
- Chain Y0
- 50S ribosomal protein L27
- Chain Y5
- 50S ribosomal protein L32
- Chain YD
- 50S ribosomal protein L2
- Chain YE
- 50S ribosomal protein L3
- Chain YF
- 50S ribosomal protein L4
- Chain YN
- 50S ribosomal protein L13
- Chain YP
- 50S ribosomal protein L15
- Chain YW
- 50S ribosomal protein L22
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