3D structure

PDB id
6OSQ (explore in PDB, NAKB, or RNA 3D Hub)
Description
RF1 accommodated state bound Release complex 70S at long incubation time point
Experimental method
ELECTRON MICROSCOPY
Resolution
3.5 Å

Loop

Sequence
GAAAGACC*GGAUAACA*UCG(2MA)(PSU)GUC*GGUUUAG*CGGUCC
Length
37 nucleotides
Bulged bases
6OSQ|1|1|A|2062, 6OSQ|1|1|A|2448, 6OSQ|1|1|U|2449, 6OSQ|1|1|U|2609
QA status
Modified nucleotides: 2MA, PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6OSQ|1|1|G|2057
6OSQ|1|1|A|2058
6OSQ|1|1|A|2059
6OSQ|1|1|A|2060
6OSQ|1|1|G|2061
6OSQ|1|1|A|2062
6OSQ|1|1|C|2063
6OSQ|1|1|C|2064
*
6OSQ|1|1|G|2446
6OSQ|1|1|G|2447
6OSQ|1|1|A|2448
6OSQ|1|1|U|2449
6OSQ|1|1|A|2450
6OSQ|1|1|A|2451
6OSQ|1|1|C|2452
6OSQ|1|1|A|2453
*
6OSQ|1|1|U|2500
6OSQ|1|1|C|2501
6OSQ|1|1|G|2502
6OSQ|1|1|2MA|2503
6OSQ|1|1|PSU|2504
6OSQ|1|1|G|2505
6OSQ|1|1|U|2506
6OSQ|1|1|C|2507
*
6OSQ|1|1|G|2582
6OSQ|1|1|G|2583
6OSQ|1|1|U|2584
6OSQ|1|1|U|2585
6OSQ|1|1|U|2586
6OSQ|1|1|A|2587
6OSQ|1|1|G|2588
*
6OSQ|1|1|C|2606
6OSQ|1|1|G|2607
6OSQ|1|1|G|2608
6OSQ|1|1|U|2609
6OSQ|1|1|C|2610
6OSQ|1|1|C|2611

Current chains

Chain 1
23S ribosomal RNA

Nearby chains

Chain 5
Transfer RNA; tRNA
Chain A
Peptide chain release factor 1
Chain B
50S ribosomal protein L2
Chain C
50S ribosomal protein L3
Chain D
50S ribosomal protein L4
Chain L
50S ribosomal protein L15
Chain M
50S ribosomal protein L16
Chain S
50S ribosomal protein L22
Chain b
50S ribosomal protein L32

Coloring options:

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