J5_6OXI_007
3D structure
- PDB id
- 6OXI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Dimeric E.coli YoeB bound to Thermus thermophilus 70S post-cleavage (UAA)
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.49 Å
Loop
- Sequence
- CGAG*CGUAG*CGAG*CGCAAG*CAAAG
- Length
- 24 nucleotides
- Bulged bases
- 6OXI|1|RA|A|654
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6OXI|1|RA|C|601
6OXI|1|RA|G|602
6OXI|1|RA|A|603
6OXI|1|RA|G|604
*
6OXI|1|RA|C|624
6OXI|1|RA|G|625
6OXI|1|RA|U|626
6OXI|1|RA|A|627
6OXI|1|RA|G|628
*
6OXI|1|RA|C|635
6OXI|1|RA|G|636
6OXI|1|RA|A|637
6OXI|1|RA|G|638
*
6OXI|1|RA|C|650
6OXI|1|RA|G|651
6OXI|1|RA|C|652
6OXI|1|RA|A|653
6OXI|1|RA|A|654
6OXI|1|RA|G|654|||A
*
6OXI|1|RA|C|654|||T
6OXI|1|RA|A|654|||U
6OXI|1|RA|A|654|||V
6OXI|1|RA|A|655
6OXI|1|RA|G|656
Current chains
- Chain RA
- 23S rRNA
Nearby chains
- Chain R8
- 50S ribosomal protein L35
- Chain RF
- 50S ribosomal protein L4
- Chain RP
- 50S ribosomal protein L15
Coloring options: