J5_6R6P_001
3D structure
- PDB id
- 6R6P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of XBP1u-paused ribosome nascent chain complex (rotated state)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- UG*CGAUGAAG*CGAACG*CG*UA
- Length
- 20 nucleotides
- Bulged bases
- 6R6P|1|8|U|38
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6R6P|1|5|U|20
6R6P|1|5|G|21
*
6R6P|1|8|C|35
6R6P|1|8|G|36
6R6P|1|8|A|37
6R6P|1|8|U|38
6R6P|1|8|G|39
6R6P|1|8|A|40
6R6P|1|8|A|41
6R6P|1|8|G|42
*
6R6P|1|8|C|101
6R6P|1|8|G|102
6R6P|1|8|A|103
6R6P|1|8|A|104
6R6P|1|8|C|105
6R6P|1|8|G|106
*
6R6P|1|8|C|113
6R6P|1|8|G|114
*
6R6P|1|8|U|136
6R6P|1|8|A|137
Current chains
- Chain 5
- 28S ribosomal RNA
- Chain 8
- 5.8S ribosomal RNA
Nearby chains
- Chain N
- Ribosomal protein L15
- Chain X
- uL23
- Chain h
- uL29
- Chain j
- Ribosomal protein L37
- Chain l
- ribosomal protein eL39
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