J5_6RXU_002
3D structure
- PDB id
- 6RXU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the 90S pre-ribosome (Kre33-Noc4) from Chaetomium thermophilum, state B1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- CUUGU*AAAUAC*GAAUG*CAAU*AUAG
- Length
- 24 nucleotides
- Bulged bases
- 6RXU|1|C1|A|1128
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6RXU|1|C1|C|618
6RXU|1|C1|U|619
6RXU|1|C1|U|620
6RXU|1|C1|G|621
6RXU|1|C1|U|622
*
6RXU|1|C1|A|1057
6RXU|1|C1|A|1058
6RXU|1|C1|A|1059
6RXU|1|C1|U|1060
6RXU|1|C1|A|1061
6RXU|1|C1|C|1062
*
6RXU|1|C1|G|1094
6RXU|1|C1|A|1095
6RXU|1|C1|A|1096
6RXU|1|C1|U|1097
6RXU|1|C1|G|1098
*
6RXU|1|C1|C|1127
6RXU|1|C1|A|1128
6RXU|1|C1|A|1129
6RXU|1|C1|U|1130
*
6RXU|1|C1|A|1176
6RXU|1|C1|U|1177
6RXU|1|C1|A|1178
6RXU|1|C1|G|1179
Current chains
- Chain C1
- 35S rRNA
Nearby chains
- Chain CI
- Bms1
- Chain CY
- U3 small nucleolar ribonucleoprotein protein lcp5-like protein
- Chain Cg
- 40S ribosomal protein s9-like protein
- Chain Cn
- 40S ribosomal protein s23-like protein
- Chain UC
- Utp3
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