J5_6T3N_001

3D structure

PDB id

6T3N (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Oceanobacillus iheyensis group II intron G-mutant (C289G/C358G/G385C) in the presence of Na+, Mg2+ and 5'-exon

Experimental method

X-RAY DIFFRACTION

Resolution

3.22 Å

Loop

Sequence

UAUAG*CGAA*UUAG*CAAAC*GGAAA

Length

23 nucleotides

Bulged bases

6T3N|1|A|A|245

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6T3N|1|A|U|24
6T3N|1|A|A|25
6T3N|1|A|U|26
6T3N|1|A|A|27
6T3N|1|A|G|28
*
6T3N|1|A|C|40
6T3N|1|A|G|41
6T3N|1|A|A|42
6T3N|1|A|A|43
*
6T3N|1|A|U|65
6T3N|1|A|U|66
6T3N|1|A|A|67
6T3N|1|A|G|68
*
6T3N|1|A|C|119
6T3N|1|A|A|120
6T3N|1|A|A|121
6T3N|1|A|A|122
6T3N|1|A|C|123
*
6T3N|1|A|G|243
6T3N|1|A|G|244
6T3N|1|A|A|245
6T3N|1|A|A|246
6T3N|1|A|A|247

Current chains

Chain A

Group IIC Intron Ribozyme

Nearby chains