J5_6TH6_005

3D structure

PDB id

6TH6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM Structure of T. kodakarensis 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.55 Å

Loop

Sequence

AGG*CGUC*GG*CG*CU

Length

13 nucleotides

Bulged bases

6TH6|1|BA|G|569, 6TH6|1|BA|U|653

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6TH6|1|BA|A|568
6TH6|1|BA|G|569
6TH6|1|BA|G|570
*
6TH6|1|BA|C|651
6TH6|1|BA|G|652
6TH6|1|BA|U|653
6TH6|1|BA|C|654
*
6TH6|1|BA|G|669
6TH6|1|BA|G|670
*
6TH6|1|BA|C|1396
6TH6|1|BA|G|1397
*
6TH6|1|BA|C|2130
6TH6|1|BA|U|2131

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BE

50S ribosomal protein L4

Chain BV

50S ribosomal protein L22

Chain Bd

50S ribosomal protein L32e