J5_6TNN_002
3D structure
- PDB id
- 6TNN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mini-RNase III (Mini-III) bound to 50S ribosome with precursor 23S rRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.07 Å
Loop
- Sequence
- CCAAAC*GGGUUGUA*UGAGUAC*GGAAUCCG*CAAG
- Length
- 33 nucleotides
- Bulged bases
- 6TNN|1|U|U|299, 6TNN|1|U|C|450
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6TNN|1|U|C|269
6TNN|1|U|C|270
6TNN|1|U|A|271
6TNN|1|U|A|272
6TNN|1|U|A|273
6TNN|1|U|C|274
*
6TNN|1|U|G|293
6TNN|1|U|G|294
6TNN|1|U|G|295
6TNN|1|U|U|296
6TNN|1|U|U|297
6TNN|1|U|G|298
6TNN|1|U|U|299
6TNN|1|U|A|300
*
6TNN|1|U|U|414
6TNN|1|U|G|415
6TNN|1|U|A|416
6TNN|1|U|G|417
6TNN|1|U|U|418
6TNN|1|U|A|419
6TNN|1|U|C|420
*
6TNN|1|U|G|444
6TNN|1|U|G|445
6TNN|1|U|A|446
6TNN|1|U|A|447
6TNN|1|U|U|448
6TNN|1|U|C|449
6TNN|1|U|C|450
6TNN|1|U|G|451
*
6TNN|1|U|C|466
6TNN|1|U|A|467
6TNN|1|U|A|468
6TNN|1|U|G|469
Current chains
- Chain U
- pre-23S rRNA
Nearby chains
- Chain u
- 50S ribosomal protein L28
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