J5_6UZ7_010
3D structure
- PDB id
- 6UZ7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- K.lactis 80S ribosome with p/PE tRNA and eIF5B
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- AGAAGACC*GGAUAACUG*CUUCGAUGUC*GGUUUAGA*UUAGUUU
- Length
- 42 nucleotides
- Bulged bases
- 6UZ7|1|5|A|2373, 6UZ7|1|5|A|2785, 6UZ7|1|5|G|2842, 6UZ7|1|5|U|2946, 6UZ7|1|5|U|2947
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6UZ7|1|5|A|2368
6UZ7|1|5|G|2369
6UZ7|1|5|A|2370
6UZ7|1|5|A|2371
6UZ7|1|5|G|2372
6UZ7|1|5|A|2373
6UZ7|1|5|C|2374
6UZ7|1|5|C|2375
*
6UZ7|1|5|G|2783
6UZ7|1|5|G|2784
6UZ7|1|5|A|2785
6UZ7|1|5|U|2786
6UZ7|1|5|A|2787
6UZ7|1|5|A|2788
6UZ7|1|5|C|2789
6UZ7|1|5|U|2790
6UZ7|1|5|G|2791
*
6UZ7|1|5|C|2835
6UZ7|1|5|U|2836
6UZ7|1|5|U|2837
6UZ7|1|5|C|2838
6UZ7|1|5|G|2839
6UZ7|1|5|A|2840
6UZ7|1|5|U|2841
6UZ7|1|5|G|2842
6UZ7|1|5|U|2843
6UZ7|1|5|C|2844
*
6UZ7|1|5|G|2919
6UZ7|1|5|G|2920
6UZ7|1|5|U|2921
6UZ7|1|5|U|2922
6UZ7|1|5|U|2923
6UZ7|1|5|A|2924
6UZ7|1|5|G|2925
6UZ7|1|5|A|2926
*
6UZ7|1|5|U|2942
6UZ7|1|5|U|2943
6UZ7|1|5|A|2944
6UZ7|1|5|G|2945
6UZ7|1|5|U|2946
6UZ7|1|5|U|2947
6UZ7|1|5|U|2948
Current chains
- Chain 5
- 25S ribosomal RNA
Nearby chains
- Chain AA
- KLLA0D16027p
- Chain AB
- 60S ribosomal protein L3
- Chain AC
- KLLA0B07139p
- Chain Bb
- 60S ribosomal protein L29
Coloring options: