J5_6VMI_004
3D structure
- PDB id
- 6VMI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the human mitochondrial ribosome-EF-G1 complex (ClassIII)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.96 Å
Loop
- Sequence
- CUUUA*UUCG*CU*AG*CGGAACAAG
- Length
- 22 nucleotides
- Bulged bases
- 6VMI|1|A|U|2739, 6VMI|1|A|G|2916, 6VMI|1|A|G|2917, 6VMI|1|A|A|2918
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6VMI|1|A|C|2736
6VMI|1|A|U|2737
6VMI|1|A|U|2738
6VMI|1|A|U|2739
6VMI|1|A|A|2740
*
6VMI|1|A|U|2807
6VMI|1|A|U|2808
6VMI|1|A|C|2809
6VMI|1|A|G|2810
*
6VMI|1|A|C|2822
6VMI|1|A|U|2823
*
6VMI|1|A|A|2845
6VMI|1|A|G|2846
*
6VMI|1|A|C|2915
6VMI|1|A|G|2916
6VMI|1|A|G|2917
6VMI|1|A|A|2918
6VMI|1|A|A|2919
6VMI|1|A|C|2920
6VMI|1|A|A|2921
6VMI|1|A|A|2922
6VMI|1|A|G|2923
Current chains
- Chain A
- 16s rRNA
Nearby chains
- Chain 3
- 39S ribosomal protein L35, mitochondrial
- Chain A7
- P-site and E-site tRNA
- Chain D
- 39S ribosomal protein L2, mitochondrial
- Chain M
- 39S ribosomal protein L15, mitochondrial
- Chain W
- 39S ribosomal protein L27, mitochondrial
- Chain X
- 39S ribosomal protein L28, mitochondrial
Coloring options: