J5_6W6K_002

3D structure

PDB id

6W6K (explore in PDB, NAKB, or RNA 3D Hub)

Description

30S-Activated-high-Mg2+

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CAAGUC*GGCGGACGGG*CACU*AGACU*AGGCAG

Length

31 nucleotides

Bulged bases

6W6K|1|A|A|109, 6W6K|1|A|C|352, 6W6K|1|A|A|353

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6W6K|1|A|C|58
6W6K|1|A|A|59
6W6K|1|A|A|60
6W6K|1|A|G|61
6W6K|1|A|U|62
6W6K|1|A|C|63
*
6W6K|1|A|G|104
6W6K|1|A|G|105
6W6K|1|A|C|106
6W6K|1|A|G|107
6W6K|1|A|G|108
6W6K|1|A|A|109
6W6K|1|A|C|110
6W6K|1|A|G|111
6W6K|1|A|G|112
6W6K|1|A|G|113
*
6W6K|1|A|C|314
6W6K|1|A|A|315
6W6K|1|A|C|316
6W6K|1|A|U|317
*
6W6K|1|A|A|336
6W6K|1|A|G|337
6W6K|1|A|A|338
6W6K|1|A|C|339
6W6K|1|A|U|340
*
6W6K|1|A|A|349
6W6K|1|A|G|350
6W6K|1|A|G|351
6W6K|1|A|C|352
6W6K|1|A|A|353
6W6K|1|A|G|354

Current chains

Chain A

16S rRNA

Nearby chains

Chain P

30S ribosomal protein S16

Chain T

30S ribosomal protein S20