J5_6WRU_002
3D structure
- PDB id
- 6WRU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the 50S subunit of the ribosome from Methicillin Resistant Staphylococcus aureus in complex with an isomer of the tedizolid
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CGAGUU*AGAC*GUUC*GC*GAGAAUG
- Length
- 23 nucleotides
- Bulged bases
- 6WRU|1|1|U|1293
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J5_6WRU_002 not in the Motif Atlas
- Homologous match to J5_4WF9_004
- Geometric discrepancy: 0.1006
- The information below is about J5_4WF9_004
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J5_74302.6
- Basepair signature
- cWW-tSH-tSS-tHW-F-cHS-F-tWS-cWW-cWW-F-cWW-cWW-F
- Number of instances in this motif group
- 4
Unit IDs
6WRU|1|1|C|627
6WRU|1|1|G|628
6WRU|1|1|A|629
6WRU|1|1|G|630
6WRU|1|1|U|631
6WRU|1|1|U|632
*
6WRU|1|1|A|713
6WRU|1|1|G|714
6WRU|1|1|A|715
6WRU|1|1|C|716
*
6WRU|1|1|G|854
6WRU|1|1|U|855
6WRU|1|1|U|856
6WRU|1|1|C|857
*
6WRU|1|1|G|1234
6WRU|1|1|C|1235
*
6WRU|1|1|G|1288
6WRU|1|1|A|1289
6WRU|1|1|G|1290
6WRU|1|1|A|1291
6WRU|1|1|A|1292
6WRU|1|1|U|1293
6WRU|1|1|G|1294
Current chains
- Chain 1
- 23S rRNA
Nearby chains
- Chain C
- 50S ribosomal protein L20
- Chain D
- 50S ribosomal protein L21
- Chain Q
- 50S ribosomal protein L35
- Chain S
- 50S ribosomal protein L4
- Chain X
- 50S ribosomal protein L15
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