J5_6WRU_004
3D structure
- PDB id
- 6WRU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the 50S subunit of the ribosome from Methicillin Resistant Staphylococcus aureus in complex with an isomer of the tedizolid
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GAAAGACC*GGAUAACAG*CCUCGAUGUC*GGUUCAG*CGGUCC
- Length
- 40 nucleotides
- Bulged bases
- 6WRU|1|1|A|2089, 6WRU|1|1|A|2475, 6WRU|1|1|U|2636
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6WRU|1|1|G|2084
6WRU|1|1|A|2085
6WRU|1|1|A|2086
6WRU|1|1|A|2087
6WRU|1|1|G|2088
6WRU|1|1|A|2089
6WRU|1|1|C|2090
6WRU|1|1|C|2091
*
6WRU|1|1|G|2473
6WRU|1|1|G|2474
6WRU|1|1|A|2475
6WRU|1|1|U|2476
6WRU|1|1|A|2477
6WRU|1|1|A|2478
6WRU|1|1|C|2479
6WRU|1|1|A|2480
6WRU|1|1|G|2481
*
6WRU|1|1|C|2525
6WRU|1|1|C|2526
6WRU|1|1|U|2527
6WRU|1|1|C|2528
6WRU|1|1|G|2529
6WRU|1|1|A|2530
6WRU|1|1|U|2531
6WRU|1|1|G|2532
6WRU|1|1|U|2533
6WRU|1|1|C|2534
*
6WRU|1|1|G|2609
6WRU|1|1|G|2610
6WRU|1|1|U|2611
6WRU|1|1|U|2612
6WRU|1|1|C|2613
6WRU|1|1|A|2614
6WRU|1|1|G|2615
*
6WRU|1|1|C|2633
6WRU|1|1|G|2634
6WRU|1|1|G|2635
6WRU|1|1|U|2636
6WRU|1|1|C|2637
6WRU|1|1|C|2638
Current chains
- Chain 1
- 23S rRNA
Nearby chains
- Chain B
- 50S ribosomal protein L2
- Chain L
- 50S ribosomal protein L3
- Chain N
- 50S ribosomal protein L32
- Chain S
- 50S ribosomal protein L4
- Chain X
- 50S ribosomal protein L15
- Chain Y
- 50S ribosomal protein L16
Coloring options: