J5_6XHW_014

3D structure

PDB id

6XHW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the A2058-unmethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.50A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.5 Å

Loop

Sequence

CGAG*CGUAG*CGAG*CGCAAG*CAAAG

Length

24 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6XHW|1|2A|C|601
6XHW|1|2A|G|602
6XHW|1|2A|A|603
6XHW|1|2A|G|604
*
6XHW|1|2A|C|624
6XHW|1|2A|G|625
6XHW|1|2A|U|626
6XHW|1|2A|A|627
6XHW|1|2A|G|628
*
6XHW|1|2A|C|635
6XHW|1|2A|G|636
6XHW|1|2A|A|637
6XHW|1|2A|G|638
*
6XHW|1|2A|C|650
6XHW|1|2A|G|651
6XHW|1|2A|C|652
6XHW|1|2A|A|652|||A
6XHW|1|2A|A|652|||B
6XHW|1|2A|G|652|||C
*
6XHW|1|2A|C|652|||V
6XHW|1|2A|A|653
6XHW|1|2A|A|654
6XHW|1|2A|A|655
6XHW|1|2A|G|656

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains

Chain 28

50S ribosomal protein L35

Chain 2F

50S ribosomal protein L4

Chain 2P

50S ribosomal protein L15